The nanoSIMS as a tool to study zonation around/in melt inclusions

Melt inclusions preserve geochemical records of magmatic processes and can provide windows into melt composition prior to near-surface fractionation processes such as degassing, crystal fractionation, and mixing that can influence the compositions of erupted magmas. The compositions of melt inclusions are usually measured near their centers using in-situ analytical techniques such as electron microprobe, ion probe, or LA-ICPMS. However, melt inclusions can experience post-entrapment modifications through crystallization or exchange with the host mineral or the outside melt via diffusion through the host mineral. For example, water loss (or gain) can occur by diffusion of H-bearing species through the host mineral toward (or from) the enclosing melt. Zonation in melt inclusions and their host minerals provide information on such post-entrapment modifications. We present a new approach to the study of such zonation using the nanoSIMS Cameca 50L high-resolution ion microprobe. Our data document mechanisms of chemical evolution of melt inclusion after entrapment and can constrain the nature and timescales of syn-eruptive processes

Volatile and major element zonation within melt inclusions: A natural diffusion experiment

The diffusivities of volatile elements in silicate melts significantly impact petrological processes [e.g. 1, 2]. Although many studies of volatile diffusion in silicic melts have been undertaken, there have been few studies in basaltic melts [e.g. 3], and most of these have concentrated on the diffusion of only one or two elements in each experiment

Chemical zonation in olivine-hosted melt inclusions

Significant zonation in major, minor, trace, and volatile elements has been documented in naturally glassy olivine-hosted melt inclusions from the Siqueiros Fracture Zone and the Galapagos Islands. Components with a higher concentration in the host olivine than in the melt (e.g., MgO, FeO, Cr_2O_3, and MnO) are depleted at the edges of the zoned melt inclusions relative to their centers, whereas except for CaO, H_2O, and F, components with a lower concentration in the host olivine than in the melt (e.g., Al_2O_3, SiO_2, Na_2O, K_2O, TiO_2, S, and Cl) are enriched near the melt inclusion edges. This zonation is due to formation of an olivine-depleted boundary layer in the adjacent melt in response to cooling and crystallization of olivine on the walls of the melt inclusions, concurrent with diffusive propagation of the boundary layer toward the inclusion center. Concentration profiles of some components in the melt inclusions exhibit multicomponent diffusion effects such as uphill diffusion (CaO, FeO) or slowing of the diffusion of typically rapidly diffusing components (Na_2O, K_2O) by coupling to slow diffusing components such as SiO_2 and Al_2O_3. Concentrations of H_2O and F decrease toward the edges of some of the Siqueiros melt inclusions, suggesting either that these components have been lost from the inclusions into the host olivine late in their cooling histories and/or that these components are exhibiting multicomponent diffusion effects. A model has been developed of the time-dependent evolution of MgO concentration profiles in melt inclusions due to simultaneous depletion of MgO at the inclusion walls due to olivine growth and diffusion of MgO in the melt inclusions in response to this depletion. Observed concentration profiles were fit to this model to constrain their thermal histories. Cooling rates determined by a single-stage linear cooling model are 150–13,000 °C h^(−1) from the liquidus down to ~1,000 °C, consistent with previously determined cooling rates for basaltic glasses; compositional trends with melt inclusion size observed in the Siqueiros melt inclusions are described well by this simple single-stage linear cooling model. Despite the overall success of the modeling of MgO concentration profiles using a single-stage cooling history, MgO concentration profiles in some melt inclusions are better fit by a two-stage cooling history with a slower-cooling first stage followed by a faster-cooling second stage; the inferred total duration of cooling from the liquidus down to ~1,000 °C ranges from 40 s to just over 1 h. Based on our observations and models, compositions of zoned melt inclusions (even if measured at the centers of the inclusions) will typically have been diffusively fractionated relative to the initially trapped melt; for such inclusions, the initial composition cannot be simply reconstructed based on olivine-addition calculations, so caution should be exercised in application of such reconstructions to correct for post-entrapment crystallization of olivine on inclusion walls. Off-center analyses of a melt inclusion can also give results significantly fractionated relative to simple olivine crystallization. All melt inclusions from the Siqueiros and Galapagos sample suites exhibit zoning profiles, and this feature may be nearly universal in glassy, olivine-hosted inclusions. If so, zoning profiles in melt inclusions could be widely useful to constrain late-stage syneruptive processes and as natural diffusion experiments

Zonation of H_(2)O and F Concentrations around Melt Inclusions in Olivines

Studies of both naturally quenched and experimentally reheated melt inclusions have established that they can lose or gain H_(2)O after entrapment in their host mineral, before or during eruption. Here we report nanoSIMS analyses of H2O, Cl and F in olivine around melt inclusions from two natural basaltic samples: one from the Sommata cinder cone on Vulcano Island in the Aeolian arc and the other from the Jorullo cinder cone in the Trans-Mexican Volcanic Belt. Our results constrain olivine/basaltic melt partition coefficients and allow assessment of mechanisms of volatile loss from melt inclusions in natural samples. Cl contents in olivine from both samples are mostly below detection limits (≤0·03 ± 0·01 ppm), with no detectable variation close to the melt inclusions. Assuming a maximum Cl content of 0·03 ppm for all olivines, maximum estimates for Cl partition coefficients between olivine and glass are 0·00002 ± 0·00002. Olivines from the two localities display contrasting H_(2)O and F compositions: Sommata olivines contain 27 ± 11 ppm H_(2)O and 0·28 ± 0·07 ppm F, whereas Jorullo olivines have lower and proportionately more variable H_(2)O and F (11 ± 12 ppm and 0·12 ± 0·09 ppm, respectively; uncertainties are two standard deviations for the entire population). The variations of H_(2)O and F contents in the olivines exhibit clear zonation patterns, increasing with proximity to melt inclusions. This pattern was most probably generated during transfer of volatiles out of the inclusions through the host olivine. H_(2)O concentration gradients surrounding melt inclusions are roughly concentric, but significantly elongated parallel to the crystallographic a-axis of olivine. Because of this preferential crystallographic orientation, this pattern is consistent with H_(2)O loss that is rate-limited by the ‘proton–polaron’ mechanism of H diffusion in olivine. Partition coefficients based on olivine compositions immediately adjacent to melt inclusions are 0·0007 ± 0·0003 for H_(2)O and 0·0005 ± 0·0003 for F. The H_(2)O and F diffusion profiles most probably formed in response to a decrease in the respective fugacities in the external melt, owing to either degassing or mixing with volatile-poor melt. Volatile transport out of inclusions might also have been driven in part by increases in the fugacity within the inclusion owing to post-entrapment crystallization. In the case of F, because of the lack of data on F diffusion in olivine, any interpretation of the measured F gradients is speculative. In the case of H_(2)O, we model the concentration gradients using a numerical model of three-dimensional anisotropic diffusion of H, where initial conditions include both H2O decrease in the external melt and post-entrapment enrichment of H_(2)O in the inclusions. The model confirms that external degassing is the dominant driving force, showing that the orientation of the anisotropy in H diffusion is consistent with the proton–polaron diffusion mechanism in olivine. The model also yields an estimate of the initial H_(2)O content of the Sommata melt inclusions before diffusive loss of 6 wt % H_(2)O. The findings provide new insights on rapid H_(2)O loss during magma ascent and improve our ability to assess the fidelity of the H_(2)O record from melt inclusions

Tumour inflammatory infiltrate predicts survival following curative resection for node-negative colorectal cancer

<b>Background</b>: A pronounced tumour inflammatory infiltrate is known to confer a good outcome in colorectal cancer. Klintrup and colleagues reported a structured assessment of the inflammatory reaction at the invasive margin scoring low grade or high grade. The aim of the present study was to examine the prognostic value of tumour inflammatory infiltrate in node-negative colorectal cancer. <b>Methods</b>: Two hundred patients had undergone surgery for node-negative colorectal cancer between 1997 and 2004. Specimens were scored with Jass’ and Klintrup’s criteria for peritumoural infiltrate. Pathological data were taken from the reports at that time. <b>Results</b>: Low-grade inflammatory infiltrate assessed using Klintrup’s criteria was an independent prognostic factor in node-negative disease. In patients with a low-risk Petersen Index (n = 179), low-grade infiltrate carried a threefold increased risk of cancer death. Low-grade infiltrate was related to increasing T stage and an infiltrating margin. <b>Conclusion</b>: Assessment of inflammatory infiltrate using Klintrup’s criteria provides independent prognostic information on node-negative colorectal cancer. A high-grade local inflammatory response may represent effective host immune responses impeding tumour growth

Towards a sustainable and equitable blue economy

The global rush to develop the \u2018blue economy\u2019 risks harming both the marine environment and human wellbeing. Bold policies and actions are urgently needed. We identify five priorities to chart a course towards an environmentally sustainable and socially equitable blue economy

Positive lymph node retrieval ratio optimises patient staging in colorectal cancer

Alternative lymph node (LN) parameters have been proposed to improve staging in colorectal cancer. This study compared these alternative parameters with conventional TNM staging in predicting long-term survival in patients undergoing curative resection. A total of 295 consecutive patients (mean age 70 years; range 39–95; s.d. 10.4) underwent resection for colorectal cancer from 2001 to 2004. Age, sex, primary tumour site, TNM stage and chemotherapy/radiotherapy were recorded. Patients with colon and rectal cancers were analysed separately for LN parameters: LN total; adequate LN retrieval (⩾12) and inadequate (<12); total number of negative LN; total number of positive LN and the ratio of positive LN to total LN (pLNR). Univariate and multivariate survival analysis was performed. The median number of LN retrieved was 10 (1–57) with adequate LN retrieval in 147 cases (49.8%). For each T and N stage, inadequate LN retrieval did not adversely affect long-term survival (P>0.05). On multivariate analysis, only pLNR was an independent predictor of overall survival in both colon and rectal cancers (HR 11.65, 95% CI 5.00–27.15, P<0.001 and HR 13.40, 95% CI 3.64–49.10, P<0.001, respectively). Application of pLNR subdivided patients into four prognostic groups. Application of the pLNR improved patient stratification in colorectal cancer and should be considered in future staging systems

Atmospheric Evolution

Earth's atmosphere has evolved as volatile species cycle between the atmosphere, ocean, biomass and the solid Earth. The geochemical, biological and astrophysical processes that control atmospheric evolution are reviewed from an "Earth Systems" perspective, with a view not only to understanding the history of Earth, but also to generalizing to other solar system planets and exoplanets.Comment: 34 pages, 3 figures, 2 tables. Accepted as a chapter in "Encyclopaedia of Geochemistry", Editor Bill White, Springer-Nature, 201

Impaired respiratory burst contributes to infections in PKCδ-deficient patients

Patients with autosomal recessive protein kinase C δ (PKCδ) deficiency suffer from childhood-onset autoimmunity, including systemic lupus erythematosus. They also suffer from recurrent infections that overlap with those seen in patients with chronic granulomatous disease (CGD), a disease caused by defects of the phagocyte NADPH oxidase and a lack of reactive oxygen species (ROS) production. We studied an international cohort of 17 PKCδ-deficient patients and found that their EBV-B cells and monocyte-derived phagocytes produced only small amounts of ROS and did not phosphorylate p40phox normally after PMA or opsonized Staphylococcus aureus stimulation. Moreover, the patients' circulating phagocytes displayed abnormally low levels of ROS production and markedly reduced neutrophil extracellular trap formation, altogether suggesting a role for PKCδ in activation of the NADPH oxidase complex. Our findings thus show that patients with PKCδ deficiency have impaired NADPH oxidase activity in various myeloid subsets, which may contribute to their CGD-like infectious phenotype

Study protocol for the recreational stimulation for elders as a vehicle to resolve delirium superimposed on dementia (Reserve For DSD) trial

<p>Abstract</p> <p>Background</p> <p>Delirium is a state of confusion characterized by an acute and fluctuating decline in cognitive functioning. Delirium is common and deadly in older adults with dementia, and is often referred to as delirium superimposed on dementia, or DSD. Interventions that treat DSD are not well-developed because the mechanisms involved in its etiology are not completely understood. We have developed a theory-based intervention for DSD that is derived from the literature on cognitive reserve and based on our prior interdisciplinary work on delirium, recreational activities, and cognitive stimulation in people with dementia. Our preliminary work indicate that use of simple, cognitively stimulating activities may help resolve delirium by helping to focus inattention, the primary neuropsychological deficit in delirium. Our primary aim in this trial is to test the efficacy of Recreational Stimulation for Elders as a Vehicle to resolve DSD (RESERVE- DSD).</p> <p>Methods/Design</p> <p>This randomized repeated measures clinical trial will involve participants being recruited and enrolled at the time of admission to post acute care. We will randomize 256 subjects to intervention (RESERVE-DSD) or control (usual care). Intervention subjects will receive 30-minute sessions of tailored cognitively stimulating recreational activities for up to 30 days. We hypothesize that subjects who receive RESERVE-DSD will have: decreased severity and duration of delirium; greater gains in attention, orientation, memory, abstract thinking, and executive functioning; and greater gains in physical function compared to subjects with DSD who receive usual care. We will also evaluate potential moderators of intervention efficacy (lifetime of complex mental activities and APOE status). Our secondary aim is to describe the costs associated with RESERVE-DSD.</p> <p>Discussion</p> <p>Our theory-based intervention, which uses simple, inexpensive recreational activities for delivering cognitive stimulation, is innovative because, to our knowledge it has not been tested as a treatment for DSD. This novel intervention for DSD builds on our prior delirium, recreational activity and cognitive stimulation research, and draws support from cognitive reserve theory.</p> <p>Trial registration</p> <p>ClinicalTrials.gov identifier: <a href="http://www.clinicaltrials.gov/ct2/show/NCT01267682">NCT01267682</a></p